Tag Index

2 items with this tag.

• Jun 12, 2026

  dynamo

  • method
  • rna-velocity
  • metabolic-labeling
  • absolute-time
  • vector-field

• Jun 12, 2026

  Metabolic labeling

  • rna-velocity
  • physical-time-grounding
  • labeling
  • absolute-time

1 item with this tag.

• Dec 29, 2025

  Geometry-preserving vector field reconstruction of high-dimensional cell-state dynamics using ddHodge

  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape
  • acceleration
  • divergence

1 item with this tag.

• Sep 21, 2023

  Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells

  • rna-velocity
  • deep-generative
  • variational
  • uncertainty
  • permutation-test
  • applicability

1 item with this tag.

• Jun 12, 2026

  scVelo

  • method
  • rna-velocity
  • baseline
  • dynamical-model
  • latent-time

4 items with this tag.

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

• Jun 12, 2026

  Cell2fate

  • method
  • rna-velocity
  • biophysics
  • module-decomposition
  • bayesian

• Mar 03, 2025

  Cell2fate infers RNA velocity modules to improve cell fate prediction

  • rna-velocity
  • biophysics
  • bayesian
  • modules
  • uncertainty
  • linearization

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

3 items with this tag.

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

• Apr 20, 2026

  Benchmarking RNA velocity methods across 17 independent studies

  • benchmark
  • rna-velocity
  • reliability
  • velocity-skepticism
  • cbdir

1 item with this tag.

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

6 items with this tag.

• Jun 12, 2026

  Gennady Gorin

  • person
  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skeptic

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

• Jun 12, 2026

  Cell2fate

  • method
  • rna-velocity
  • biophysics
  • module-decomposition
  • bayesian

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

• Mar 03, 2025

  Cell2fate infers RNA velocity modules to improve cell fate prediction

  • rna-velocity
  • biophysics
  • bayesian
  • modules
  • uncertainty
  • linearization

1 item with this tag.

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

1 item with this tag.

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

1 item with this tag.

• Jun 12, 2026

  Lior Pachter

  • person
  • lab
  • velocity-skeptic
  • caltech

1 item with this tag.

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

1 item with this tag.

• Apr 20, 2026

  Benchmarking RNA velocity methods across 17 independent studies

  • benchmark
  • rna-velocity
  • reliability
  • velocity-skepticism
  • cbdir

5 items with this tag.

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

• Oct 31, 2024

  Uncovering cell cycle speed modulations with statistical inference (News & Views)

  • commentary
  • news-and-views
  • cell-cycle
  • manifold-constrained
  • statistical-inference

1 item with this tag.

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

2 items with this tag.

• Jun 12, 2026

  cellDancer (relay velocity model)

  • method
  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn

• Apr 03, 2023

  A relay velocity model infers cell-dependent RNA velocity (cellDancer)

  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn
  • relay

1 item with this tag.

• Jun 11, 2026

  RegVelo: Gene-regulatory-informed dynamics of single cells

  • rna-velocity
  • grn
  • deep-generative
  • perturbation
  • cellrank
  • neural-crest

2 items with this tag.

• Jun 12, 2026

  Gennady Gorin

  • person
  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skeptic

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

2 items with this tag.

• Jun 12, 2026

  MultiVelo

  • method
  • rna-velocity
  • multiomics
  • latent-time
  • chromatin

• Oct 13, 2022

  Multi-omic single-cell velocity models epigenome–transcriptome interactions (MultiVelo)

  • rna-velocity
  • multiomics
  • chromatin
  • latent-time
  • welch-lab

1 item with this tag.

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

1 item with this tag.

• Oct 31, 2024

  Uncovering cell cycle speed modulations with statistical inference (News & Views)

  • commentary
  • news-and-views
  • cell-cycle
  • manifold-constrained
  • statistical-inference

2 items with this tag.

• Jun 12, 2026

  Velocity skepticism

  • critique
  • physical-time-grounding
  • identifiability
  • normalization
  • discourse

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

5 items with this tag.

• Jun 12, 2026

  RegVelo

  • method
  • rna-velocity
  • grn
  • deep-generative
  • perturbation

• Jun 12, 2026

  VeloVAE

  • method
  • rna-velocity
  • vae
  • variational
  • deep-generative

• Jun 12, 2026

  veloVI

  • method
  • rna-velocity
  • deep-generative
  • variational

• Jun 11, 2026

  RegVelo: Gene-regulatory-informed dynamics of single cells

  • rna-velocity
  • grn
  • deep-generative
  • perturbation
  • cellrank
  • neural-crest

• Sep 21, 2023

  Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells

  • rna-velocity
  • deep-generative
  • variational
  • uncertainty
  • permutation-test
  • applicability

1 item with this tag.

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

2 items with this tag.

• Jun 12, 2026

  Velocity skepticism

  • critique
  • physical-time-grounding
  • identifiability
  • normalization
  • discourse

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

2 items with this tag.

• Jun 12, 2026

  Potential landscape

  • waddington
  • potential
  • divergence
  • potency
  • dynamics

• Dec 29, 2025

  Geometry-preserving vector field reconstruction of high-dimensional cell-state dynamics using ddHodge

  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape
  • acceleration
  • divergence

2 items with this tag.

• Jun 12, 2026

  cellDancer (relay velocity model)

  • method
  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn

• Apr 03, 2023

  A relay velocity model infers cell-dependent RNA velocity (cellDancer)

  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn
  • relay

1 item with this tag.

• Jun 12, 2026

  CellRank

  • method
  • fate-probability
  • markov
  • terminal-states
  • downstream

1 item with this tag.

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

2 items with this tag.

• Jun 12, 2026

  scVelo

  • method
  • rna-velocity
  • baseline
  • dynamical-model
  • latent-time

• Dec 01, 2020

  Generalizing RNA velocity to transient cell states through dynamical modeling (scVelo)

  • rna-velocity
  • dynamical-model
  • latent-time
  • em
  • scvelo
  • theis

5 items with this tag.

• Jun 12, 2026

  Flow matching

  • flow-matching
  • generative
  • dynamics
  • our-work

• Jun 12, 2026

  Hodge decomposition

  • vector-field
  • geometry
  • hodge
  • dynamics
  • math

• Jun 12, 2026

  Optimal transport

  • optimal-transport
  • schrodinger-bridge
  • dynamics
  • time-series

• Jun 12, 2026

  Potential landscape

  • waddington
  • potential
  • divergence
  • potency
  • dynamics

• Jun 12, 2026

  Transport operators

  • transport
  • dynamics
  • our-work

1 item with this tag.

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

2 items with this tag.

• Feb 15, 2024

  TFvelo: gene regulation inspired RNA velocity estimation

  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors
  • em

• Dec 01, 2020

  Generalizing RNA velocity to transient cell states through dynamical modeling (scVelo)

  • rna-velocity
  • dynamical-model
  • latent-time
  • em
  • scvelo
  • theis

2 items with this tag.

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

1 item with this tag.

• Jun 12, 2026

  CellRank

  • method
  • fate-probability
  • markov
  • terminal-states
  • downstream

1 item with this tag.

• Jun 12, 2026

  Flow matching

  • flow-matching
  • generative
  • dynamics
  • our-work

1 item with this tag.

• Aug 18, 2025

  spVelo: RNA velocity inference for multi-batch spatial transcriptomics data

  • rna-velocity
  • spatial
  • multi-batch
  • vae
  • gat
  • velovi

1 item with this tag.

• Jun 12, 2026

  Flow matching

  • flow-matching
  • generative
  • dynamics
  • our-work

2 items with this tag.

• Jun 12, 2026

  Hodge decomposition

  • vector-field
  • geometry
  • hodge
  • dynamics
  • math

• Jun 12, 2026

  Manifold-consistent velocity

  • rna-velocity
  • manifold
  • tangent-space
  • geometry
  • identifiability

3 items with this tag.

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  Spatial velocity

  • rna-velocity
  • spatial
  • migration
  • gnn
  • physical-units

• Jul 16, 2025

  Topological velocity inference from spatial transcriptomic data (TopoVelo)

  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units
  • vae

1 item with this tag.

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

4 items with this tag.

• Jun 12, 2026

  RegVelo

  • method
  • rna-velocity
  • grn
  • deep-generative
  • perturbation

• Jun 12, 2026

  GRN-informed velocity

  • rna-velocity
  • grn
  • regulation
  • perturbation

• Jun 12, 2026

  GRN (gene regulatory network)

  • grn
  • regulation
  • transcription-factors
  • network-inference

• Jun 11, 2026

  RegVelo: Gene-regulatory-informed dynamics of single cells

  • rna-velocity
  • grn
  • deep-generative
  • perturbation
  • cellrank
  • neural-crest

2 items with this tag.

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Feb 15, 2024

  TFvelo: gene regulation inspired RNA velocity estimation

  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors
  • em

1 item with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

1 item with this tag.

• Jun 12, 2026

  Hodge decomposition

  • vector-field
  • geometry
  • hodge
  • dynamics
  • math

2 items with this tag.

• Jun 12, 2026

  ddHodge

  • method
  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape

• Dec 29, 2025

  Geometry-preserving vector field reconstruction of high-dimensional cell-state dynamics using ddHodge

  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape
  • acceleration
  • divergence

6 items with this tag.

• Jun 12, 2026

  Latent time

  • rna-velocity
  • pseudotime
  • identifiability
  • time

• Jun 12, 2026

  Manifold-consistent velocity

  • rna-velocity
  • manifold
  • tangent-space
  • geometry
  • identifiability

• Jun 12, 2026

  Physical-time grounding

  • rna-velocity
  • identifiability
  • latent-time
  • kinetics
  • methodology

• Jun 12, 2026

  Splicing kinetics ODE

  • rna-velocity
  • kinetics
  • identifiability
  • ode

• Jun 12, 2026

  Velocity skepticism

  • critique
  • physical-time-grounding
  • identifiability
  • normalization
  • discourse

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

1 item with this tag.

• Jun 12, 2026

  JuloVelo

  • method
  • rna-velocity
  • our-work
  • julia

1 item with this tag.

• Jun 12, 2026

  Hu Yizhou (胡益洲)

  • person
  • rna-velocity-2018
  • karolinska
  • linnarsson

3 items with this tag.

• Jun 12, 2026

  RNA velocity

  • rna-velocity
  • single-cell
  • trajectory
  • kinetics

• Jun 12, 2026

  Physical-time grounding

  • rna-velocity
  • identifiability
  • latent-time
  • kinetics
  • methodology

• Jun 12, 2026

  Splicing kinetics ODE

  • rna-velocity
  • kinetics
  • identifiability
  • ode

5 items with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

• Jun 12, 2026

  Lior Pachter

  • person
  • lab
  • velocity-skeptic
  • caltech

1 item with this tag.

• Jun 12, 2026

  Metabolic labeling

  • rna-velocity
  • physical-time-grounding
  • labeling
  • absolute-time

7 items with this tag.

• Jun 12, 2026

  MultiVelo

  • method
  • rna-velocity
  • multiomics
  • latent-time
  • chromatin

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Jun 12, 2026

  scVelo

  • method
  • rna-velocity
  • baseline
  • dynamical-model
  • latent-time

• Jun 12, 2026

  Physical-time grounding

  • rna-velocity
  • identifiability
  • latent-time
  • kinetics
  • methodology

• Nov 03, 2022

  UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time
  • murk

• Oct 13, 2022

  Multi-omic single-cell velocity models epigenome–transcriptome interactions (MultiVelo)

  • rna-velocity
  • multiomics
  • chromatin
  • latent-time
  • welch-lab

• Dec 01, 2020

  Generalizing RNA velocity to transient cell states through dynamical modeling (scVelo)

  • rna-velocity
  • dynamical-model
  • latent-time
  • em
  • scvelo
  • theis

1 item with this tag.

• Mar 03, 2025

  Cell2fate infers RNA velocity modules to improve cell fate prediction

  • rna-velocity
  • biophysics
  • bayesian
  • modules
  • uncertainty
  • linearization

1 item with this tag.

• Jun 12, 2026

  Hu Yizhou (胡益洲)

  • person
  • rna-velocity-2018
  • karolinska
  • linnarsson

1 item with this tag.

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

1 item with this tag.

• Aug 22, 2025

  GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells

  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • mack-genes
  • murk-genes

3 items with this tag.

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

• Jun 12, 2026

  Manifold-consistent velocity

  • rna-velocity
  • manifold
  • tangent-space
  • geometry
  • identifiability

• Aug 22, 2025

  GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells

  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • mack-genes
  • murk-genes

3 items with this tag.

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

• Oct 31, 2024

  Uncovering cell cycle speed modulations with statistical inference (News & Views)

  • commentary
  • news-and-views
  • cell-cycle
  • manifold-constrained
  • statistical-inference

1 item with this tag.

• Jun 12, 2026

  CellRank

  • method
  • fate-probability
  • markov
  • terminal-states
  • downstream

1 item with this tag.

• Jun 12, 2026

  Hodge decomposition

  • vector-field
  • geometry
  • hodge
  • dynamics
  • math

3 items with this tag.

• Jun 12, 2026

  dynamo

  • method
  • rna-velocity
  • metabolic-labeling
  • absolute-time
  • vector-field

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

• Aug 08, 2018

  RNA velocity of single cells (La Manno et al. 2018)

  • rna-velocity
  • origin
  • steady-state
  • physical-time
  • metabolic-labeling
  • phase-portrait

19 items with this tag. Showing first 10 tags.

• Jun 12, 2026

  CellRank

  • method
  • fate-probability
  • markov
  • terminal-states
  • downstream

• Jun 12, 2026

  DeepVelo (Chen et al. 2022, neural-ODE)

  • method
  • rna-velocity
  • neural-ode
  • vae
  • vector-field

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

• Jun 12, 2026

  JuloVelo

  • method
  • rna-velocity
  • our-work
  • julia

• Jun 12, 2026

  MultiVelo

  • method
  • rna-velocity
  • multiomics
  • latent-time
  • chromatin

• Jun 12, 2026

  RegVelo

  • method
  • rna-velocity
  • grn
  • deep-generative
  • perturbation

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

1 item with this tag.

• Jun 12, 2026

  Physical-time grounding

  • rna-velocity
  • identifiability
  • latent-time
  • kinetics
  • methodology

2 items with this tag.

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

3 items with this tag.

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  Spatial velocity

  • rna-velocity
  • spatial
  • migration
  • gnn
  • physical-units

• Jul 16, 2025

  Topological velocity inference from spatial transcriptomic data (TopoVelo)

  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units
  • vae

1 item with this tag.

• Jun 12, 2026

  Cell2fate

  • method
  • rna-velocity
  • biophysics
  • module-decomposition
  • bayesian

1 item with this tag.

• Mar 03, 2025

  Cell2fate infers RNA velocity modules to improve cell fate prediction

  • rna-velocity
  • biophysics
  • bayesian
  • modules
  • uncertainty
  • linearization

2 items with this tag.

• Jun 12, 2026

  spVelo

  • method
  • rna-velocity
  • spatial
  • multi-batch

• Aug 18, 2025

  spVelo: RNA velocity inference for multi-batch spatial transcriptomics data

  • rna-velocity
  • spatial
  • multi-batch
  • vae
  • gat
  • velovi

2 items with this tag.

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

• Aug 22, 2025

  GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells

  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • mack-genes
  • murk-genes

3 items with this tag.

• Jun 12, 2026

  MultiVelo

  • method
  • rna-velocity
  • multiomics
  • latent-time
  • chromatin

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

• Oct 13, 2022

  Multi-omic single-cell velocity models epigenome–transcriptome interactions (MultiVelo)

  • rna-velocity
  • multiomics
  • chromatin
  • latent-time
  • welch-lab

3 items with this tag.

• Jun 12, 2026

  cellDancer (relay velocity model)

  • method
  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn

• Apr 03, 2023

  A relay velocity model infers cell-dependent RNA velocity (cellDancer)

  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn
  • relay

• Nov 03, 2022

  UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time
  • murk

1 item with this tag.

• Aug 22, 2025

  GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells

  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • mack-genes
  • murk-genes

1 item with this tag.

• Jun 12, 2026

  GRN (gene regulatory network)

  • grn
  • regulation
  • transcription-factors
  • network-inference

1 item with this tag.

• Jun 11, 2026

  RegVelo: Gene-regulatory-informed dynamics of single cells

  • rna-velocity
  • grn
  • deep-generative
  • perturbation
  • cellrank
  • neural-crest

2 items with this tag.

• Jun 12, 2026

  DeepVelo (Chen et al. 2022, neural-ODE)

  • method
  • rna-velocity
  • neural-ode
  • vae
  • vector-field

• Nov 30, 2022

  DeepVelo: single-cell transcriptomic deep velocity field learning with neural ODEs

  • rna-velocity
  • neural-ode
  • vae
  • vector-field
  • perturbation

1 item with this tag.

• Oct 31, 2024

  Uncovering cell cycle speed modulations with statistical inference (News & Views)

  • commentary
  • news-and-views
  • cell-cycle
  • manifold-constrained
  • statistical-inference

3 items with this tag.

• Jun 12, 2026

  Gennady Gorin

  • person
  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skeptic

• Jun 12, 2026

  Velocity skepticism

  • critique
  • physical-time-grounding
  • identifiability
  • normalization
  • discourse

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

1 item with this tag.

• Jun 12, 2026

  Splicing kinetics ODE

  • rna-velocity
  • kinetics
  • identifiability
  • ode

1 item with this tag.

• Jun 12, 2026

  Optimal transport

  • optimal-transport
  • schrodinger-bridge
  • dynamics
  • time-series

3 items with this tag.

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

• Jun 12, 2026

  velocyto (RNA velocity, 2018 steady-state model)

  • method
  • rna-velocity
  • origin
  • steady-state
  • tool

• Aug 08, 2018

  RNA velocity of single cells (La Manno et al. 2018)

  • rna-velocity
  • origin
  • steady-state
  • physical-time
  • metabolic-labeling
  • phase-portrait

3 items with this tag.

• Jun 12, 2026

  JuloVelo

  • method
  • rna-velocity
  • our-work
  • julia

• Jun 12, 2026

  Flow matching

  • flow-matching
  • generative
  • dynamics
  • our-work

• Jun 12, 2026

  Transport operators

  • transport
  • dynamics
  • our-work

1 item with this tag.

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

1 item with this tag.

• Sep 21, 2023

  Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells

  • rna-velocity
  • deep-generative
  • variational
  • uncertainty
  • permutation-test
  • applicability

7 items with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

• Jun 12, 2026

  Gennady Gorin

  • person
  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skeptic

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

• Jun 12, 2026

  Hu Yizhou (胡益洲)

  • person
  • rna-velocity-2018
  • karolinska
  • linnarsson

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

• Jun 12, 2026

  Lior Pachter

  • person
  • lab
  • velocity-skeptic
  • caltech

4 items with this tag.

• Jun 12, 2026

  RegVelo

  • method
  • rna-velocity
  • grn
  • deep-generative
  • perturbation

• Jun 12, 2026

  GRN-informed velocity

  • rna-velocity
  • grn
  • regulation
  • perturbation

• Jun 11, 2026

  RegVelo: Gene-regulatory-informed dynamics of single cells

  • rna-velocity
  • grn
  • deep-generative
  • perturbation
  • cellrank
  • neural-crest

• Nov 30, 2022

  DeepVelo: single-cell transcriptomic deep velocity field learning with neural ODEs

  • rna-velocity
  • neural-ode
  • vae
  • vector-field
  • perturbation

1 item with this tag.

• Aug 08, 2018

  RNA velocity of single cells (La Manno et al. 2018)

  • rna-velocity
  • origin
  • steady-state
  • physical-time
  • metabolic-labeling
  • phase-portrait

2 items with this tag.

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

• Aug 08, 2018

  RNA velocity of single cells (La Manno et al. 2018)

  • rna-velocity
  • origin
  • steady-state
  • physical-time
  • metabolic-labeling
  • phase-portrait

3 items with this tag.

• Jun 12, 2026

  Overview

  • rna-velocity
  • physical-time-grounding

• Jun 12, 2026

  Metabolic labeling

  • rna-velocity
  • physical-time-grounding
  • labeling
  • absolute-time

• Jun 12, 2026

  Velocity skepticism

  • critique
  • physical-time-grounding
  • identifiability
  • normalization
  • discourse

3 items with this tag.

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  Spatial velocity

  • rna-velocity
  • spatial
  • migration
  • gnn
  • physical-units

• Jul 16, 2025

  Topological velocity inference from spatial transcriptomic data (TopoVelo)

  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units
  • vae

1 item with this tag.

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

1 item with this tag.

• Jun 12, 2026

  Potential landscape

  • waddington
  • potential
  • divergence
  • potency
  • dynamics

1 item with this tag.

• Jun 12, 2026

  Potential landscape

  • waddington
  • potential
  • divergence
  • potency
  • dynamics

2 items with this tag.

• Jun 12, 2026

  ddHodge

  • method
  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape

• Dec 29, 2025

  Geometry-preserving vector field reconstruction of high-dimensional cell-state dynamics using ddHodge

  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape
  • acceleration
  • divergence

1 item with this tag.

• Jun 12, 2026

  Latent time

  • rna-velocity
  • pseudotime
  • identifiability
  • time

2 items with this tag.

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Nov 03, 2022

  UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time
  • murk

2 items with this tag.

• Jun 12, 2026

  GRN-informed velocity

  • rna-velocity
  • grn
  • regulation
  • perturbation

• Jun 12, 2026

  GRN (gene regulatory network)

  • grn
  • regulation
  • transcription-factors
  • network-inference

1 item with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

1 item with this tag.

• Apr 03, 2023

  A relay velocity model infers cell-dependent RNA velocity (cellDancer)

  • rna-velocity
  • cell-specific-rates
  • murk
  • dnn
  • relay

2 items with this tag.

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

• Apr 20, 2026

  Benchmarking RNA velocity methods across 17 independent studies

  • benchmark
  • rna-velocity
  • reliability
  • velocity-skepticism
  • cbdir

44 items with this tag. Showing first 10 tags.

• Jun 12, 2026

  DeepVelo (Chen et al. 2022, neural-ODE)

  • method
  • rna-velocity
  • neural-ode
  • vae
  • vector-field

• Jun 12, 2026

  Gioele La Manno

  • person
  • lab
  • epfl
  • rna-velocity
  • origin
  • cell-cycle

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

• Jun 12, 2026

  JuloVelo

  • method
  • rna-velocity
  • our-work
  • julia

• Jun 12, 2026

  MultiVelo

  • method
  • rna-velocity
  • multiomics
  • latent-time
  • chromatin

• Jun 12, 2026

  RegVelo

  • method
  • rna-velocity
  • grn
  • deep-generative
  • perturbation

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

1 item with this tag.

• Jun 12, 2026

  Hu Yizhou (胡益洲)

  • person
  • rna-velocity-2018
  • karolinska
  • linnarsson

1 item with this tag.

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

1 item with this tag.

• Jun 12, 2026

  Optimal transport

  • optimal-transport
  • schrodinger-bridge
  • dynamics
  • time-series

2 items with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

• Dec 01, 2020

  Generalizing RNA velocity to transient cell states through dynamical modeling (scVelo)

  • rna-velocity
  • dynamical-model
  • latent-time
  • em
  • scvelo
  • theis

1 item with this tag.

• Jun 12, 2026

  RNA velocity

  • rna-velocity
  • single-cell
  • trajectory
  • kinetics

6 items with this tag.

• Jun 12, 2026

  TopoVelo

  • method
  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units

• Jun 12, 2026

  spVelo

  • method
  • rna-velocity
  • spatial
  • multi-batch

• Jun 12, 2026

  Spatial velocity

  • rna-velocity
  • spatial
  • migration
  • gnn
  • physical-units

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

• Aug 18, 2025

  spVelo: RNA velocity inference for multi-batch spatial transcriptomics data

  • rna-velocity
  • spatial
  • multi-batch
  • vae
  • gat
  • velovi

• Jul 16, 2025

  Topological velocity inference from spatial transcriptomic data (TopoVelo)

  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units
  • vae

2 items with this tag.

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Feb 15, 2024

  TFvelo: gene regulation inspired RNA velocity estimation

  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors
  • em

3 items with this tag.

• Jun 12, 2026

  VeloCycle

  • method
  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • metric-time
  • statistical-inference

• Oct 31, 2024

  Statistical inference with a manifold-constrained RNA velocity model uncovers cell cycle speed modulations

  • rna-velocity
  • manifold-constrained
  • bayesian
  • cell-cycle
  • physical-time
  • metric-time
  • statistical-inference
  • live-imaging

• Oct 31, 2024

  Uncovering cell cycle speed modulations with statistical inference (News & Views)

  • commentary
  • news-and-views
  • cell-cycle
  • manifold-constrained
  • statistical-inference

2 items with this tag.

• Jun 12, 2026

  velocyto (RNA velocity, 2018 steady-state model)

  • method
  • rna-velocity
  • origin
  • steady-state
  • tool

• Aug 08, 2018

  RNA velocity of single cells (La Manno et al. 2018)

  • rna-velocity
  • origin
  • steady-state
  • physical-time
  • metabolic-labeling
  • phase-portrait

1 item with this tag.

• Jun 12, 2026

  Felix Naef

  • person
  • lab
  • epfl
  • systems-biology
  • circadian
  • cell-cycle

3 items with this tag.

• Jun 12, 2026

  GraphVelo

  • method
  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • plugin

• Jun 12, 2026

  Manifold-consistent velocity

  • rna-velocity
  • manifold
  • tangent-space
  • geometry
  • identifiability

• Aug 22, 2025

  GraphVelo allows for accurate inference of multimodal velocities and molecular mechanisms for single cells

  • rna-velocity
  • manifold
  • tangent-space
  • multimodal
  • mack-genes
  • murk-genes

1 item with this tag.

• Jun 12, 2026

  CellRank

  • method
  • fate-probability
  • markov
  • terminal-states
  • downstream

1 item with this tag.

• Dec 01, 2020

  Generalizing RNA velocity to transient cell states through dynamical modeling (scVelo)

  • rna-velocity
  • dynamical-model
  • latent-time
  • em
  • scvelo
  • theis

1 item with this tag.

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

1 item with this tag.

• Jun 12, 2026

  Latent time

  • rna-velocity
  • pseudotime
  • identifiability
  • time

1 item with this tag.

• Jun 12, 2026

  Optimal transport

  • optimal-transport
  • schrodinger-bridge
  • dynamics
  • time-series

1 item with this tag.

• Jun 12, 2026

  velocyto (RNA velocity, 2018 steady-state model)

  • method
  • rna-velocity
  • origin
  • steady-state
  • tool

4 items with this tag.

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Feb 15, 2024

  TFvelo: gene regulation inspired RNA velocity estimation

  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors
  • em

• Nov 03, 2022

  UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time
  • murk

1 item with this tag.

• Jun 12, 2026

  RNA velocity

  • rna-velocity
  • single-cell
  • trajectory
  • kinetics

3 items with this tag.

• Jun 12, 2026

  TFvelo

  • method
  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors

• Jun 12, 2026

  GRN (gene regulatory network)

  • grn
  • regulation
  • transcription-factors
  • network-inference

• Feb 15, 2024

  TFvelo: gene regulation inspired RNA velocity estimation

  • rna-velocity
  • grn-informed
  • splicing-free
  • top-down
  • transcription-factors
  • em

1 item with this tag.

• Jun 12, 2026

  Transport operators

  • transport
  • dynamics
  • our-work

2 items with this tag.

• Mar 03, 2025

  Cell2fate infers RNA velocity modules to improve cell fate prediction

  • rna-velocity
  • biophysics
  • bayesian
  • modules
  • uncertainty
  • linearization

• Sep 21, 2023

  Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells

  • rna-velocity
  • deep-generative
  • variational
  • uncertainty
  • permutation-test
  • applicability

2 items with this tag.

• Jun 12, 2026

  UniTVelo

  • method
  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time

• Nov 03, 2022

  UniTVelo: temporally unified RNA velocity reinforces single-cell trajectory inference

  • rna-velocity
  • unified-time
  • rbf
  • top-down
  • latent-time
  • murk

5 items with this tag.

• Jun 12, 2026

  DeepVelo (Chen et al. 2022, neural-ODE)

  • method
  • rna-velocity
  • neural-ode
  • vae
  • vector-field

• Jun 12, 2026

  VeloVAE

  • method
  • rna-velocity
  • vae
  • variational
  • deep-generative

• Aug 18, 2025

  spVelo: RNA velocity inference for multi-batch spatial transcriptomics data

  • rna-velocity
  • spatial
  • multi-batch
  • vae
  • gat
  • velovi

• Jul 16, 2025

  Topological velocity inference from spatial transcriptomic data (TopoVelo)

  • rna-velocity
  • spatial
  • gnn
  • migration
  • physical-units
  • vae

• Nov 30, 2022

  DeepVelo: single-cell transcriptomic deep velocity field learning with neural ODEs

  • rna-velocity
  • neural-ode
  • vae
  • vector-field
  • perturbation

3 items with this tag.

• Jun 12, 2026

  VeloVAE

  • method
  • rna-velocity
  • vae
  • variational
  • deep-generative

• Jun 12, 2026

  veloVI

  • method
  • rna-velocity
  • deep-generative
  • variational

• Sep 21, 2023

  Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells

  • rna-velocity
  • deep-generative
  • variational
  • uncertainty
  • permutation-test
  • applicability

6 items with this tag.

• Jun 12, 2026

  DeepVelo (Chen et al. 2022, neural-ODE)

  • method
  • rna-velocity
  • neural-ode
  • vae
  • vector-field

• Jun 12, 2026

  ddHodge

  • method
  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape

• Jun 12, 2026

  dynamo

  • method
  • rna-velocity
  • metabolic-labeling
  • absolute-time
  • vector-field

• Jun 12, 2026

  Hodge decomposition

  • vector-field
  • geometry
  • hodge
  • dynamics
  • math

• Dec 29, 2025

  Geometry-preserving vector field reconstruction of high-dimensional cell-state dynamics using ddHodge

  • rna-velocity
  • hodge-decomposition
  • vector-field
  • potential-landscape
  • acceleration
  • divergence

• Nov 30, 2022

  DeepVelo: single-cell transcriptomic deep velocity field learning with neural ODEs

  • rna-velocity
  • neural-ode
  • vae
  • vector-field
  • perturbation

3 items with this tag.

• Jun 12, 2026

  Gennady Gorin

  • person
  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skeptic

• Jun 12, 2026

  Jianhua Xing (邢建華)

  • person
  • lab
  • dynamo
  • graphvelo
  • theory
  • biophysics
  • velocity-skeptic

• Jun 12, 2026

  Lior Pachter

  • person
  • lab
  • velocity-skeptic
  • caltech

5 items with this tag.

• Jun 04, 2026

  RNA-velocity discourse 2025–2026 (bookmarked tweets digest)

  • discourse
  • bookmarks
  • velocity-skepticism
  • benchmark
  • spatial
  • multiomics

• Jun 01, 2026

  Challenges and progress in RNA velocity: Comparative analysis across multiple biological contexts

  • benchmark
  • velocity-skepticism
  • reliability
  • driver-genes
  • robustness
  • biohub

• Apr 20, 2026

  Benchmarking RNA velocity methods across 17 independent studies

  • benchmark
  • rna-velocity
  • reliability
  • velocity-skepticism
  • cbdir

• Dec 19, 2025

  Fundamental errors in RNA velocity arising from the omission of cell growth

  • critique
  • biophysics
  • identifiability
  • cell-growth
  • dilution
  • metabolic-labeling
  • velocity-skepticism

• Nov 07, 2025

  Monod: model-based discovery and integration through fitting stochastic transcriptional dynamics to single-cell data

  • biophysics
  • chemical-master-equation
  • normalization
  • velocity-skepticism
  • pachter-lab
  • bursting
  • capture-bias

2 items with this tag.

• Jun 12, 2026

  Fabian Theis

  • person
  • lab
  • regvelo
  • scvelo
  • velovi
  • helmholtz

• Aug 18, 2025

  spVelo: RNA velocity inference for multi-batch spatial transcriptomics data

  • rna-velocity
  • spatial
  • multi-batch
  • vae
  • gat
  • velovi

1 item with this tag.

• Jun 12, 2026

  Potential landscape

  • waddington
  • potential
  • divergence
  • potency
  • dynamics

1 item with this tag.

• Oct 13, 2022

  Multi-omic single-cell velocity models epigenome–transcriptome interactions (MultiVelo)

  • rna-velocity
  • multiomics
  • chromatin
  • latent-time
  • welch-lab